Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | DWY53_12020 | Not Available | Positive | 2842479 - 2843423 | 35932.4 |
| susc/raga family tonb-linked outer membrane protein | DWY53_12025 | Not Available | Positive | 2843577 - 2846933 | 124921.0 |
| arginine--trna ligase | DWY53_12030 | Not Available | Positive | 2847659 - 2849479 | 68001.7 |
| ribonuclease h | DWY53_12035 | Not Available | Positive | 2849480 - 2850106 | 23847.5 |
| alkaline phosphatase family protein | DWY53_12040 | Not Available | Positive | 2850122 - 2851948 | 68065.2 |
| dolichyl-phosphate-mannose--protein mannosyltransferase | DWY53_12045 | Not Available | Negative | 2852032 - 2853756 | 65345.0 |
| gtra family protein | DWY53_12050 | Not Available | Positive | 2853843 - 2854217 | 14231.0 |
| glycosyltransferase | DWY53_12055 | Not Available | Positive | 2854254 - 2855201 | 36580.4 |
| alkaline phosphatase family protein | DWY53_12060 | Not Available | Negative | 2855232 - 2857259 | 77468.0 |
| glycosyltransferase family 2 protein | DWY53_12065 | Not Available | Negative | 2857438 - 2858427 | 38644.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

