Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 43 | DWY53_11970 | Not Available | Negative | 2828550 - 2829872 | 49754.7 |
| arylsulfatase | DWY53_11975 | Not Available | Negative | 2830272 - 2831687 | 53013.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_11980 | Not Available | Negative | 2831705 - 2833330 | 61301.6 |
| susc/raga family tonb-linked outer membrane protein | DWY53_11985 | Not Available | Negative | 2833343 - 2836708 | 124233.0 |
| fecr family protein | DWY53_11990 | Not Available | Negative | 2836963 - 2837976 | 38547.1 |
| rna polymerase sigma-70 factor | DWY53_11995 | Not Available | Positive | 2838120 - 2838686 | 22251.9 |
| dna-binding protein | DWY53_12000 | Not Available | Negative | 2838879 - 2839559 | 25970.1 |
| helicase | DWY53_12005 | Not Available | Positive | 2839888 - 2841285 | 53086.0 |
| duf1573 domain-containing protein | DWY53_12010 | Not Available | Positive | 2841410 - 2841691 | 10436.5 |
| rna polymerase sigma-70 factor | DWY53_12015 | Not Available | Positive | 2841773 - 2842360 | 22849.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

