Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-acp reductase | DWY53_00945 | Not Available | Positive | 250193 - 251050 | 31326.5 |
| gliding motility lipoprotein gldb | DWY53_00950 | Not Available | Positive | 251058 - 252059 | 38875.2 |
| sam-dependent methyltransferase | DWY53_00955 | Not Available | Positive | 252083 - 252787 | 26022.9 |
| hypothetical protein | DWY53_00960 | Not Available | Negative | 252803 - 253792 | 37752.0 |
| lipoyl synthase | DWY53_00965 | Not Available | Negative | 253850 - 254704 | 31713.2 |
| s9 family peptidase | DWY53_00970 | Not Available | Negative | 254803 - 257004 | 83440.0 |
| tigr01212 family radical sam protein | DWY53_00975 | Not Available | Positive | 257091 - 258017 | 35539.8 |
| fpra family a-type flavoprotein | DWY53_00980 | Not Available | Positive | 258033 - 259220 | 44710.8 |
| mechanosensitive ion channel family protein | DWY53_00985 | Not Available | Negative | 259316 - 260149 | 30653.8 |
| threonylcarbamoyl-amp synthase | DWY53_00990 | Not Available | Negative | 260198 - 260812 | 23089.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

