Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit l | DWY53_11865 | Not Available | Negative | 2801912 - 2803813 | 70328.2 |
| nadh-quinone oxidoreductase subunit nuok | DWY53_11870 | Not Available | Negative | 2803816 - 2804124 | 11758.6 |
| nadh-quinone oxidoreductase subunit j | DWY53_11875 | Not Available | Negative | 2804130 - 2804633 | 18224.2 |
| nadh-quinone oxidoreductase subunit i | DWY53_11880 | Not Available | Negative | 2804649 - 2805101 | 16944.7 |
| nadh-quinone oxidoreductase subunit h | DWY53_11885 | Not Available | Negative | 2805101 - 2806177 | 40265.7 |
| nadh-quinone oxidoreductase subunit c/d | DWY53_11890 | Not Available | Negative | 2806301 - 2807860 | 59743.6 |
| nadh-quinone oxidoreductase subunit b | DWY53_11895 | Not Available | Negative | 2807857 - 2808453 | 22081.9 |
| nadh-quinone oxidoreductase subunit a | DWY53_11900 | Not Available | Negative | 2808444 - 2808794 | 13099.5 |
| hypothetical protein | DWY53_11905 | Not Available | Negative | 2808898 - 2809275 | 14644.8 |
| trkh family potassium uptake protein | DWY53_11910 | Not Available | Negative | 2809378 - 2810832 | 53478.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

