Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_11805 | Not Available | Positive | 2789123 - 2789302 | 7092.65 |
| port family protein | DWY53_11810 | Not Available | Negative | 2789468 - 2790157 | 25264.2 |
| hypothetical protein | DWY53_11815 | Not Available | Negative | 2790292 - 2791959 | 64193.7 |
| alpha-l-fucosidase | DWY53_11825 | Not Available | Negative | 2792649 - 2793974 | 50388.9 |
| gtp-binding protein | DWY53_11830 | Not Available | Positive | 2794123 - 2795373 | 47753.1 |
| glycoside hydrolase family 28 protein | DWY53_11835 | Not Available | Negative | 2795437 - 2796843 | 52418.7 |
| atp-binding protein | DWY53_11845 | Not Available | Positive | 2797278 - 2797520 | 8923.97 |
| glucuronyl hydrolase | DWY53_11850 | Not Available | Negative | 2797522 - 2798748 | 46658.1 |
| nadh-quinone oxidoreductase subunit n | DWY53_11855 | Not Available | Negative | 2798924 - 2800345 | 52268.5 |
| nadh-quinone oxidoreductase subunit m | DWY53_11860 | Not Available | Negative | 2800377 - 2801858 | 53794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

