Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | DWY53_11755 | Not Available | Positive | 2778211 - 2781126 | 109277.0 |
| hypothetical protein | DWY53_11760 | Not Available | Positive | 2781197 - 2781409 | 8022.03 |
| duf3836 domain-containing protein | DWY53_11765 | Not Available | Positive | 2781436 - 2781822 | 15047.1 |
| redox-regulated atpase ychf | DWY53_11770 | Not Available | Positive | 2782024 - 2783127 | 40815.9 |
| ketopantoate reductase family protein | DWY53_11775 | Not Available | Positive | 2783252 - 2784163 | 33089.2 |
| prolipoprotein diacylglyceryl transferase | DWY53_11780 | Not Available | Positive | 2784160 - 2784981 | 31477.1 |
| chloramphenicol acetyltransferase | DWY53_11785 | Not Available | Positive | 2784982 - 2785638 | 25277.0 |
| porin family protein | DWY53_11790 | Not Available | Negative | 2785874 - 2786572 | 25718.4 |
| hypothetical protein | DWY53_11795 | Not Available | Negative | 2786881 - 2787126 | 9220.3 |
| hypothetical protein | DWY53_11800 | Not Available | Negative | 2787243 - 2788901 | 63793.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

