Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna maturation rnase ybey | DWY53_11705 | Not Available | Positive | 2767584 - 2768000 | 15837.9 |
| hypothetical protein | DWY53_11710 | Not Available | Positive | 2768227 - 2768760 | 20260.5 |
| flotillin family protein | DWY53_11715 | Not Available | Positive | 2768786 - 2770486 | 62444.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DWY53_11720 | Not Available | Positive | 2770633 - 2772504 | 69589.1 |
| adenine phosphoribosyltransferase | DWY53_11725 | Not Available | Positive | 2772564 - 2773088 | 19189.4 |
| excinuclease abc subunit uvrc | DWY53_11730 | Not Available | Positive | 2773250 - 2775070 | 69888.8 |
| d-tyrosyl-trna(tyr) deacylase | DWY53_11735 | Not Available | Positive | 2775228 - 2775680 | 16476.0 |
| pyrophosphatase | DWY53_11740 | Not Available | Positive | 2775680 - 2776000 | 12338.7 |
| deoxyribose-phosphate aldolase | DWY53_11745 | Not Available | Positive | 2776007 - 2776954 | 34794.2 |
| polyprenyl synthetase family protein | DWY53_11750 | Not Available | Negative | 2777145 - 2778119 | 36285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

