Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acid phosphatase | DWY53_11655 | Not Available | Negative | 2753576 - 2754547 | 37239.9 |
| tonb-dependent receptor | DWY53_11660 | Not Available | Negative | 2754558 - 2757326 | 104197.0 |
| hypothetical protein | DWY53_11665 | Not Available | Negative | 2757651 - 2758172 | 19971.1 |
| hypothetical protein | DWY53_11670 | Not Available | Negative | 2758261 - 2761188 | 106643.0 |
| arac family transcriptional regulator | DWY53_11675 | Not Available | Negative | 2761233 - 2761727 | 19177.3 |
| site-specific integrase | DWY53_11680 | Not Available | Negative | 2762537 - 2763475 | 36160.6 |
| murein l,d-transpeptidase | DWY53_11685 | Not Available | Positive | 2763683 - 2764702 | 38984.9 |
| hypothetical protein | DWY53_11690 | Not Available | Positive | 2764705 - 2765502 | 29151.1 |
| hypothetical protein | DWY53_11695 | Not Available | Negative | 2765533 - 2765790 | 9707.39 |
| hypothetical protein | DWY53_11700 | Not Available | Positive | 2766307 - 2767539 | 44161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

