Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_11545 | Not Available | Negative | 2731724 - 2732098 | 14007.7 |
| hypothetical protein | DWY53_11550 | Not Available | Negative | 2732169 - 2732504 | 12242.5 |
| hypothetical protein | DWY53_11555 | Not Available | Negative | 2732565 - 2732843 | 10179.3 |
| pp_02274 | DWY53_11560 | Not Available | Negative | 2733140 - 2734057 | Not Available |
| acyl-coa thioesterase | DWY53_11565 | Not Available | Positive | 2734116 - 2734523 | 15657.8 |
| dna-protecting protein dpra | DWY53_11570 | Not Available | Positive | 2734520 - 2735635 | 40940.4 |
| glycoside hydrolase family 29 | DWY53_11575 | Not Available | Negative | 2735716 - 2737599 | 70662.0 |
| duf3575 domain-containing protein | DWY53_11585 | Not Available | Positive | 2738194 - 2739561 | 52080.2 |
| duf5119 domain-containing protein | DWY53_11590 | Not Available | Positive | 2739528 - 2740523 | 36296.9 |
| fimbrillin family protein | DWY53_11595 | Not Available | Positive | 2740572 - 2741561 | 35806.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

