Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_11440 | Not Available | Positive | 2712928 - 2713494 | 21604.5 |
| hypothetical protein | DWY53_11445 | Not Available | Positive | 2713494 - 2714327 | 30377.1 |
| hypothetical protein | DWY53_11450 | Not Available | Positive | 2714542 - 2715063 | 20045.9 |
| hypothetical protein | DWY53_11455 | Not Available | Positive | 2715071 - 2715259 | 7156.75 |
| phage tail tape measure protein | DWY53_11460 | Not Available | Positive | 2715262 - 2719125 | 142620.0 |
| hypothetical protein | DWY53_11465 | Not Available | Positive | 2719122 - 2719691 | 21695.3 |
| hypothetical protein | DWY53_11470 | Not Available | Positive | 2719792 - 2720061 | 10219.5 |
| rna polymerase sigma factor | DWY53_11475 | Not Available | Positive | 2720058 - 2720543 | 18850.8 |
| duf2693 domain-containing protein | DWY53_11480 | Not Available | Positive | 2720649 - 2720981 | 13139.2 |
| hypothetical protein | DWY53_11485 | Not Available | Positive | 2721142 - 2723820 | 101618.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

