Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (fe-s)-binding protein | DWY53_11190 | Not Available | Negative | 2678685 - 2679425 | 27294.1 |
| dna-binding response regulator | DWY53_11195 | Not Available | Negative | 2679737 - 2680348 | 22691.8 |
| hemerythrin domain-containing protein | DWY53_11200 | Not Available | Negative | 2680345 - 2681040 | 27000.4 |
| tryptophan-rich sensory protein | DWY53_11205 | Not Available | Negative | 2681167 - 2681631 | 18151.9 |
| hypothetical protein | DWY53_11210 | Not Available | Positive | 2682189 - 2682377 | 7312.14 |
| hypothetical protein | DWY53_11215 | Not Available | Negative | 2682700 - 2683206 | 19775.3 |
| hypothetical protein | DWY53_11220 | Not Available | Negative | 2683295 - 2684218 | 36450.8 |
| xre family transcriptional regulator | DWY53_11225 | Not Available | Negative | 2684221 - 2684637 | 15527.9 |
| hypothetical protein | DWY53_11230 | Not Available | Positive | 2684828 - 2685067 | 9089.08 |
| hypothetical protein | DWY53_11235 | Not Available | Positive | 2685098 - 2685286 | 7176.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

