Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-arabinofuranosidase | DWY53_10930 | Not Available | Positive | 2598684 - 2601182 | 92455.5 |
| beta-galactosidase | DWY53_10935 | Not Available | Positive | 2601199 - 2603547 | 88335.6 |
| glycosyl hydrolase | DWY53_10940 | Not Available | Positive | 2603658 - 2606009 | 88954.3 |
| addiction module toxin rele | DWY53_10945 | Not Available | Negative | 2606062 - 2606403 | 12875.8 |
| hypothetical protein | DWY53_10950 | Not Available | Negative | 2606393 - 2606668 | 10421.8 |
| exonuclease subunit sbcd | DWY53_10955 | Not Available | Positive | 2606840 - 2608042 | 44943.9 |
| atp-dependent exonuclease | DWY53_10960 | Not Available | Positive | 2608039 - 2611122 | 116159.0 |
| hypothetical protein | DWY53_10965 | Not Available | Positive | 2611248 - 2611466 | 7895.11 |
| hybrid sensor histidine kinase/response regulator | DWY53_10970 | Not Available | Negative | 2611548 - 2615834 | 162841.0 |
| l-rhamnose mutarotase | DWY53_10975 | Not Available | Negative | 2615915 - 2616229 | 12242.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

