Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2156 domain-containing protein | DWY53_10830 | Not Available | Positive | 2560680 - 2561582 | 34354.3 |
| gnat family n-acetyltransferase | DWY53_10835 | Not Available | Positive | 2561566 - 2562576 | 39029.0 |
| tigr00159 family protein | DWY53_10840 | Not Available | Negative | 2562654 - 2563418 | 28478.5 |
| dihydropteroate synthase | DWY53_10845 | Not Available | Negative | 2563450 - 2564307 | 31984.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DWY53_10850 | Not Available | Positive | 2564426 - 2565724 | 48354.2 |
| neuraminidase | DWY53_10855 | Not Available | Positive | 2566147 - 2567421 | 49248.1 |
| duf2264 domain-containing protein | DWY53_10860 | Not Available | Positive | 2567513 - 2569828 | 88793.9 |
| duf3810 domain-containing protein | DWY53_10865 | Not Available | Positive | 2569970 - 2571010 | 40933.9 |
| hybrid sensor histidine kinase/response regulator | DWY53_10870 | Not Available | Negative | 2571227 - 2575261 | 153394.0 |
| hypothetical protein | DWY53_10875 | Not Available | Positive | 2575359 - 2575553 | 7450.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

