Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l34 | DWY53_10780 | Not Available | Negative | 2552888 - 2553043 | 6019.34 |
| elongation factor p | DWY53_10785 | Not Available | Positive | 2553246 - 2553812 | 21126.5 |
| glycosyltransferase | DWY53_10790 | Not Available | Positive | 2553914 - 2554903 | 37604.6 |
| dna repair protein radc | DWY53_10795 | Not Available | Positive | 2554977 - 2555666 | 25617.0 |
| duf59 domain-containing protein | DWY53_10800 | Not Available | Positive | 2555703 - 2556023 | 11973.4 |
| udp-2,3-diacylglucosamine diphosphatase | DWY53_10805 | Not Available | Positive | 2556156 - 2556923 | 29795.7 |
| acetate kinase | DWY53_10810 | Not Available | Negative | 2556989 - 2558185 | 42809.0 |
| phosphate acetyltransferase | DWY53_10815 | Not Available | Negative | 2558211 - 2559224 | 35492.5 |
| cida/lrga family protein | DWY53_10820 | Not Available | Positive | 2559427 - 2559780 | 13036.8 |
| lrgb family protein | DWY53_10825 | Not Available | Positive | 2559761 - 2560456 | 24440.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

