Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_10725 | Not Available | Positive | 2537689 - 2538135 | 17482.0 |
| pkd domain-containing protein | DWY53_10730 | Not Available | Positive | 2538146 - 2539087 | 35920.8 |
| hypothetical protein | DWY53_10735 | Not Available | Positive | 2539084 - 2541432 | 89816.4 |
| hypothetical protein | DWY53_10740 | Not Available | Positive | 2541437 - 2542240 | 30973.5 |
| type vi secretion system needle protein hcp | DWY53_10745 | Not Available | Positive | 2542753 - 2543148 | 14717.3 |
| type iv secretion protein rhs | DWY53_10750 | Not Available | Positive | 2543260 - 2545017 | 63506.3 |
| hypothetical protein | DWY53_10755 | Not Available | Positive | 2545014 - 2546363 | 51537.6 |
| hypothetical protein | DWY53_10760 | Not Available | Positive | 2546398 - 2549516 | 116117.0 |
| atpase | DWY53_10770 | Not Available | Positive | 2550135 - 2551280 | 42903.4 |
| anaerobic sulfatase-maturation protein | DWY53_10775 | Not Available | Positive | 2551474 - 2552709 | 48053.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

