Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_10620 | Not Available | Positive | 2518527 - 2518673 | 5230.33 |
| parb/repb/spo0j family partition protein | DWY53_10625 | Not Available | Negative | 2518733 - 2520478 | 66898.1 |
| hypothetical protein | DWY53_10630 | Not Available | Negative | 2520567 - 2520926 | 13925.5 |
| atp-binding protein | DWY53_10635 | Not Available | Positive | 2521025 - 2522344 | 51148.6 |
| hypothetical protein | DWY53_10640 | Not Available | Negative | 2522414 - 2522668 | 9555.67 |
| para family protein | DWY53_10645 | Not Available | Negative | 2522675 - 2523430 | 27423.8 |
| single-stranded dna-binding protein | DWY53_10650 | Not Available | Negative | 2523669 - 2524082 | 15263.9 |
| tetr/acrr family transcriptional regulator | DWY53_10660 | Not Available | Negative | 2524769 - 2525509 | 28800.0 |
| hypothetical protein | DWY53_10665 | Not Available | Positive | 2525735 - 2525923 | 7443.35 |
| hypothetical protein | DWY53_10670 | Not Available | Negative | 2525953 - 2526411 | 18028.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

