Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugative transposon protein tram | DWY53_10565 | Not Available | Positive | 2510631 - 2511800 | 43102.0 |
| hypothetical protein | DWY53_10570 | Not Available | Positive | 2511813 - 2512157 | 13532.1 |
| conjugative transposon protein tran | DWY53_10575 | Not Available | Positive | 2512204 - 2513055 | 32265.9 |
| hypothetical protein | DWY53_10580 | Not Available | Positive | 2513052 - 2513564 | 18960.1 |
| duf1566 domain-containing protein | DWY53_10585 | Not Available | Positive | 2513587 - 2514243 | 23980.3 |
| hypothetical protein | DWY53_10590 | Not Available | Positive | 2514257 - 2514994 | 28068.0 |
| type iv secretory system conjugative dna transfer family protein | DWY53_10595 | Not Available | Positive | 2514998 - 2517184 | 83173.4 |
| hypothetical protein | DWY53_10605 | Not Available | Negative | 2517677 - 2517949 | 10270.8 |
| hypothetical protein | DWY53_10610 | Not Available | Negative | 2517965 - 2518240 | 10781.1 |
| hypothetical protein | DWY53_10615 | Not Available | Positive | 2518319 - 2518561 | 9340.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

