Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_10515 | Not Available | Positive | 2501862 - 2502500 | 25491.6 |
| hypothetical protein | DWY53_10520 | Not Available | Positive | 2502505 - 2505036 | 95859.3 |
| hypothetical protein | DWY53_10525 | Not Available | Positive | 2505033 - 2505758 | 28000.6 |
| site-specific dna-methyltransferase | DWY53_10530 | Not Available | Positive | 2505969 - 2506739 | 29551.6 |
| duf5045 domain-containing protein | DWY53_10535 | Not Available | Positive | 2506809 - 2507579 | 28577.6 |
| hypothetical protein | DWY53_10540 | Not Available | Positive | 2507594 - 2508727 | 42015.2 |
| hypothetical protein | DWY53_10545 | Not Available | Positive | 2508727 - 2509146 | 17283.0 |
| conjugative transposon protein trak | DWY53_10550 | Not Available | Positive | 2509153 - 2509767 | 23637.8 |
| hypothetical protein | DWY53_10555 | Not Available | Positive | 2509780 - 2510154 | 14508.5 |
| adenine methyltransferase | DWY53_10560 | Not Available | Positive | 2510165 - 2510647 | 18413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

