Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_10465 | Not Available | Positive | 2492589 - 2493719 | 43203.6 |
| hypothetical protein | DWY53_10470 | Not Available | Positive | 2493857 - 2494630 | 29327.5 |
| dna-binding protein | DWY53_10475 | Not Available | Positive | 2494808 - 2495206 | 15553.8 |
| mobilization protein | DWY53_10480 | Not Available | Positive | 2495184 - 2496290 | 41851.2 |
| dna primase | DWY53_10485 | Not Available | Positive | 2496397 - 2497284 | 34262.1 |
| hypothetical protein | DWY53_10490 | Not Available | Positive | 2497517 - 2497969 | 16785.6 |
| duf4134 domain-containing protein | DWY53_10495 | Not Available | Positive | 2497905 - 2498294 | 14192.8 |
| duf4134 domain-containing protein | DWY53_10500 | Not Available | Positive | 2498356 - 2498733 | 13396.2 |
| duf4133 domain-containing protein | DWY53_10505 | Not Available | Positive | 2498747 - 2499040 | 10592.3 |
| duf87 domain-containing protein | DWY53_10510 | Not Available | Positive | 2499151 - 2501862 | 104134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

