Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0104 family protein | DWY53_10345 | Not Available | Negative | 2471179 - 2472180 | 37585.2 |
| cdp-alcohol phosphatidyltransferase family protein | DWY53_10350 | Not Available | Negative | 2472177 - 2473127 | 37224.4 |
| hypothetical protein | DWY53_10355 | Not Available | Negative | 2473135 - 2473986 | 31795.0 |
| ndp-sugar synthase | DWY53_10360 | Not Available | Negative | 2474006 - 2474716 | 26297.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | DWY53_10365 | Not Available | Negative | 2474758 - 2475858 | 40647.4 |
| duf4837 family protein | DWY53_10370 | Not Available | Negative | 2475892 - 2476956 | 40606.1 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DWY53_10375 | Not Available | Negative | 2476982 - 2478031 | 39554.0 |
| duf4922 domain-containing protein | DWY53_10380 | Not Available | Positive | 2478118 - 2480589 | 94515.1 |
| spoiid/lytb domain-containing protein | DWY53_10385 | Not Available | Positive | 2480646 - 2481962 | 49960.9 |
| mfs transporter | DWY53_10390 | Not Available | Positive | 2482020 - 2483294 | 47720.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

