Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_10295 | Not Available | Negative | 2462397 - 2462690 | 11293.8 |
| exodeoxyribonuclease iii | DWY53_10300 | Not Available | Negative | 2462847 - 2463602 | 29696.0 |
| preprotein translocase subunit secg | DWY53_10305 | Not Available | Negative | 2463766 - 2464131 | 12571.2 |
| tetratricopeptide repeat protein | DWY53_10310 | Not Available | Negative | 2464137 - 2464889 | 29436.1 |
| hypothetical protein | DWY53_10315 | Not Available | Negative | 2464906 - 2465433 | 19738.6 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_10320 | Not Available | Negative | 2465420 - 2466685 | 46861.1 |
| inositol-3-phosphate synthase | DWY53_10325 | Not Available | Negative | 2466852 - 2468159 | 48823.8 |
| ribokinase | DWY53_10330 | Not Available | Positive | 2468295 - 2469191 | 33171.6 |
| sugar mfs transporter | DWY53_10335 | Not Available | Negative | 2469246 - 2470445 | 44345.3 |
| had family hydrolase | DWY53_10340 | Not Available | Negative | 2470452 - 2471174 | 27106.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

