Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4199 domain-containing protein | DWY53_10195 | Not Available | Positive | 2446741 - 2447274 | 20508.6 |
| glycosyltransferase | DWY53_10200 | Not Available | Positive | 2447278 - 2448231 | 36346.1 |
| hypothetical protein | DWY53_10205 | Not Available | Positive | 2448233 - 2448781 | 20757.9 |
| hypothetical protein | DWY53_10210 | Not Available | Positive | 2448729 - 2449430 | 26539.9 |
| manganese efflux pump | DWY53_10215 | Not Available | Positive | 2449434 - 2450006 | 21225.7 |
| fad:protein fmn transferase | DWY53_10220 | Not Available | Positive | 2450020 - 2451036 | 37820.5 |
| marc family protein | DWY53_10225 | Not Available | Negative | 2451195 - 2451797 | 22154.0 |
| crp/fnr family transcriptional regulator | DWY53_10230 | Not Available | Positive | 2451985 - 2452662 | 26004.6 |
| m3 family peptidase | DWY53_10235 | Not Available | Positive | 2452820 - 2454862 | 77841.4 |
| duf4847 domain-containing protein | DWY53_10240 | Not Available | Positive | 2454876 - 2455370 | 18544.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

