Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4038 domain-containing protein | DWY53_10145 | Not Available | Negative | 2434235 - 2435704 | 56349.4 |
| glycoside hydrolase family 88 protein | DWY53_10150 | Not Available | Negative | 2435855 - 2437054 | 45343.0 |
| glycoside hydrolase family 95 protein | DWY53_10155 | Not Available | Negative | 2437103 - 2439547 | 92069.8 |
| enolase | DWY53_10160 | Not Available | Positive | 2439713 - 2441008 | 46741.8 |
| aaa family atpase | DWY53_10165 | Not Available | Negative | 2441113 - 2442681 | 60534.9 |
| hypothetical protein | DWY53_10170 | Not Available | Positive | 2443330 - 2443530 | 7352.06 |
| hypothetical protein | DWY53_10175 | Not Available | Positive | 2443570 - 2443776 | 8050.69 |
| atp-dependent dna helicase recq | DWY53_10180 | Not Available | Negative | 2443879 - 2446296 | 91795.2 |
| Trna-thr | Not Available | Not Available | Positive | 2446408 - 2446481 | Not Available |
| hypothetical protein | DWY53_10190 | Not Available | Positive | 2446486 - 2446734 | 9849.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

