Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DWY53_10095 | Not Available | Negative | 2415284 - 2416117 | 32289.8 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_10100 | Not Available | Positive | 2416265 - 2417380 | 40051.3 |
| hydrophobe/amphiphile efflux-1 family rnd transporter | DWY53_10105 | Not Available | Positive | 2417389 - 2420604 | 117313.0 |
| tolc family protein | DWY53_10110 | Not Available | Positive | 2420601 - 2421974 | 50273.8 |
| duf4934 domain-containing protein | DWY53_10115 | Not Available | Negative | 2422055 - 2423287 | 46077.8 |
| duf3332 domain-containing protein | DWY53_10120 | Not Available | Negative | 2423368 - 2423781 | 14728.3 |
| alpha-rhamnosidase | DWY53_10125 | Not Available | Negative | 2423916 - 2426060 | 81995.8 |
| right-handed parallel beta-helix repeat-containing protein | DWY53_10130 | Not Available | Negative | 2426075 - 2427898 | 68606.0 |
| glycoside hydrolase family 127 protein | DWY53_10135 | Not Available | Negative | 2427923 - 2430028 | 78760.8 |
| alpha-rhamnosidase | DWY53_10140 | Not Available | Negative | 2430255 - 2434229 | 149807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

