Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2520 domain-containing protein | DWY53_09785 | Not Available | Positive | 2354122 - 2354928 | 29767.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | DWY53_09790 | Not Available | Positive | 2354934 - 2355452 | 19125.2 |
| septum formation protein maf | DWY53_09795 | Not Available | Positive | 2355470 - 2356051 | 21744.3 |
| 2-hydroxyacid dehydrogenase | DWY53_09800 | Not Available | Positive | 2356118 - 2357125 | 37643.4 |
| duf3843 family protein | DWY53_09805 | Not Available | Negative | 2357122 - 2358291 | 45914.6 |
| duf2721 domain-containing protein | DWY53_09810 | Not Available | Positive | 2358410 - 2358799 | 14601.4 |
| mfs transporter | DWY53_09815 | Not Available | Negative | 2358801 - 2359976 | 42744.6 |
| tlpa family protein disulfide reductase | DWY53_09820 | Not Available | Positive | 2360036 - 2360557 | 19811.9 |
| abc transporter atp-binding protein | DWY53_09835 | Not Available | Positive | 2362517 - 2363359 | 31481.2 |
| hypothetical protein | DWY53_09840 | Not Available | Positive | 2363374 - 2364264 | 33916.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

