Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | DWY53_09735 | Not Available | Positive | 2346105 - 2346863 | 27233.0 |
| alpha-amlyase | DWY53_09740 | Not Available | Negative | 2346959 - 2347207 | 9267.24 |
| sodium ion-translocating decarboxylase subunit beta | DWY53_09745 | Not Available | Negative | 2347382 - 2348542 | 40880.4 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DWY53_09750 | Not Available | Negative | 2348544 - 2348975 | 15152.5 |
| lamin tail domain-containing protein | DWY53_09755 | Not Available | Negative | 2348999 - 2349928 | 34102.0 |
| acyl-coa carboxylase subunit beta | DWY53_09760 | Not Available | Negative | 2349963 - 2351516 | 56473.9 |
| methylmalonyl-coa epimerase | DWY53_09765 | Not Available | Negative | 2351619 - 2352032 | 14910.1 |
| gnat family n-acetyltransferase | DWY53_09770 | Not Available | Negative | 2352189 - 2353211 | 40023.0 |
| nad(p)h nitroreductase | DWY53_09775 | Not Available | Positive | 2353257 - 2353793 | 20051.4 |
| hypothetical protein | DWY53_09780 | Not Available | Positive | 2353796 - 2354122 | 11854.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

