Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_09670 | Not Available | Negative | 2335545 - 2336777 | 46830.8 |
| site-specific integrase | DWY53_09675 | Not Available | Negative | 2336797 - 2338026 | 47089.6 |
| hypothetical protein | DWY53_09690 | Not Available | Negative | 2339115 - 2339327 | 8649.7 |
| ph domain-containing protein | DWY53_09695 | Not Available | Negative | 2339447 - 2339890 | 16630.7 |
| hypothetical protein | DWY53_09700 | Not Available | Negative | 2340059 - 2340493 | 16883.9 |
| crp/fnr family transcriptional regulator | DWY53_09710 | Not Available | Positive | 2341022 - 2341585 | 22255.1 |
| acyltransferase | DWY53_09715 | Not Available | Positive | 2341703 - 2342854 | 43063.7 |
| transcriptional repressor | DWY53_09720 | Not Available | Negative | 2343027 - 2343452 | 16179.7 |
| heavy metal translocating p-type atpase | DWY53_09725 | Not Available | Negative | 2343466 - 2345184 | 62472.2 |
| esterase family protein | DWY53_09730 | Not Available | Positive | 2345282 - 2346100 | 30789.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

