Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DWY53_09620 | Not Available | Negative | 2327250 - 2328449 | 46817.5 |
| hypothetical protein | DWY53_09625 | Not Available | Negative | 2328454 - 2329287 | 32153.3 |
| mobilization protein | DWY53_09630 | Not Available | Negative | 2329340 - 2330287 | 36355.9 |
| plasmid mobilization relaxosome protein mobc | DWY53_09635 | Not Available | Negative | 2330284 - 2330685 | 15447.7 |
| duf3408 domain-containing protein | DWY53_09640 | Not Available | Negative | 2330898 - 2331362 | 17748.0 |
| dna-binding protein | DWY53_09645 | Not Available | Positive | 2331816 - 2332136 | 12604.1 |
| dna-binding protein | DWY53_09650 | Not Available | Positive | 2332177 - 2332482 | 11954.3 |
| fic family protein | DWY53_09655 | Not Available | Positive | 2332644 - 2333666 | 38587.4 |
| hypothetical protein | DWY53_09660 | Not Available | Positive | 2334136 - 2334336 | 7768.14 |
| s49 family peptidase | DWY53_09665 | Not Available | Positive | 2334341 - 2335222 | 32990.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

