Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_09520 | Not Available | Positive | 2297077 - 2298366 | 48139.5 |
| deoxyribonuclease iv | DWY53_09525 | Not Available | Positive | 2298409 - 2299245 | 31427.5 |
| trpb-like pyridoxal phosphate-dependent enzyme | DWY53_09530 | Not Available | Negative | 2299561 - 2300925 | 50244.2 |
| potassium transporter | DWY53_09535 | Not Available | Positive | 2301102 - 2302949 | 68643.9 |
| trka family potassium uptake protein | DWY53_09540 | Not Available | Positive | 2302952 - 2303638 | 25637.0 |
| duf4738 domain-containing protein | DWY53_09545 | Not Available | Positive | 2303853 - 2304422 | 21153.6 |
| hypothetical protein | DWY53_09550 | Not Available | Positive | 2304515 - 2304955 | 16654.3 |
| l-serine ammonia-lyase | DWY53_09555 | Not Available | Negative | 2305134 - 2306342 | 43967.2 |
| metallophosphatase | DWY53_09560 | Not Available | Negative | 2306492 - 2307655 | 44465.8 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_09565 | Not Available | Negative | 2307676 - 2309124 | 54497.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

