Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_09365 | Not Available | Positive | 2245053 - 2246567 | 57726.9 |
| gliding motility lipoprotein gldh | DWY53_09370 | Not Available | Positive | 2246530 - 2247027 | 18762.5 |
| rod shape-determining protein roda | DWY53_09375 | Not Available | Negative | 2247031 - 2248485 | 54268.6 |
| penicillin-binding protein 2 | DWY53_09380 | Not Available | Negative | 2248466 - 2250316 | 69195.5 |
| rod shape-determining protein mred | DWY53_09385 | Not Available | Negative | 2250316 - 2250816 | 18956.0 |
| rod shape-determining protein mrec | DWY53_09390 | Not Available | Negative | 2250825 - 2251673 | 31395.4 |
| rod shape-determining protein | DWY53_09395 | Not Available | Negative | 2251779 - 2252801 | 36937.0 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase purh | DWY53_09400 | Not Available | Negative | 2252914 - 2254437 | 56236.2 |
| inorganic phosphate transporter | DWY53_09405 | Not Available | Positive | 2254719 - 2256971 | 83827.5 |
| aminoglycoside phosphotransferase | DWY53_09410 | Not Available | Positive | 2257079 - 2258161 | 41591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

