Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_09315 | Not Available | Negative | 2236466 - 2237314 | 31517.4 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | DWY53_09320 | Not Available | Negative | 2237343 - 2238017 | 24887.2 |
| thymidine kinase | DWY53_09325 | Not Available | Positive | 2238222 - 2238821 | 22372.9 |
| ai-2e family transporter | DWY53_09330 | Not Available | Positive | 2238832 - 2239968 | 42701.1 |
| Trna-lys | Not Available | Not Available | Positive | 2240060 - 2240135 | Not Available |
| hypothetical protein | DWY53_09340 | Not Available | Negative | 2240470 - 2240721 | 9699.76 |
| hypothetical protein | DWY53_09345 | Not Available | Negative | 2240764 - 2240838 | 2617.08 |
| cardiolipin synthase | DWY53_09350 | Not Available | Positive | 2241207 - 2242502 | 49710.2 |
| methylenetetrahydrofolate reductase | DWY53_09355 | Not Available | Positive | 2242858 - 2243811 | 36181.4 |
| dna polymerase iii subunit delta | DWY53_09360 | Not Available | Positive | 2243839 - 2244963 | 43533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

