Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_09260 | Not Available | Negative | 2221553 - 2222044 | 17873.6 |
| hypothetical protein | DWY53_09265 | Not Available | Negative | 2222063 - 2222284 | 8766.94 |
| carbon starvation protein a | DWY53_09270 | Not Available | Negative | 2222271 - 2223701 | 52285.6 |
| s-layer protein | DWY53_09275 | Not Available | Positive | 2223780 - 2225459 | 64186.7 |
| hypothetical protein | DWY53_09280 | Not Available | Positive | 2225625 - 2225840 | 7928.93 |
| tonb-dependent receptor | DWY53_09290 | Not Available | Positive | 2226560 - 2229472 | 107761.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_09295 | Not Available | Positive | 2229485 - 2230981 | 56804.6 |
| tonb-dependent receptor | DWY53_09300 | Not Available | Positive | 2231257 - 2234046 | 103857.0 |
| ragb/susd family nutrient uptake outer membrane protein | DWY53_09305 | Not Available | Positive | 2234075 - 2235550 | 54874.2 |
| noncanonical pyrimidine nucleotidase, yjjg family | DWY53_09310 | Not Available | Negative | 2235701 - 2236390 | 26926.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

