Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4924 family protein | DWY53_09210 | Not Available | Negative | 2202790 - 2203332 | 21340.1 |
| lyse family translocator | DWY53_09215 | Not Available | Negative | 2203404 - 2204063 | 24333.7 |
| phosphoribosylformylglycinamidine synthase | DWY53_09220 | Not Available | Positive | 2204214 - 2207918 | 137186.0 |
| hybrid sensor histidine kinase/response regulator | DWY53_09225 | Not Available | Positive | 2207996 - 2212012 | 154451.0 |
| chromate transporter | DWY53_09230 | Not Available | Positive | 2212017 - 2212565 | 20451.8 |
| chromate transporter | DWY53_09235 | Not Available | Positive | 2212562 - 2213134 | 21054.4 |
| hypothetical protein | DWY53_09240 | Not Available | Negative | 2213421 - 2214920 | 58071.4 |
| excinuclease abc subunit uvra | DWY53_09245 | Not Available | Positive | 2215002 - 2217803 | 104874.0 |
| endonuclease/exonuclease/phosphatase family protein | DWY53_09250 | Not Available | Positive | 2218049 - 2219080 | 39595.6 |
| beta-n-acetylhexosaminidase | DWY53_09255 | Not Available | Positive | 2219137 - 2221443 | 85868.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

