Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-bladed beta-propeller | DWY53_09155 | Not Available | Negative | 2191647 - 2192741 | 41967.5 |
| hypothetical protein | DWY53_09160 | Not Available | Negative | 2192830 - 2193078 | 9017.95 |
| hypothetical protein | DWY53_09170 | Not Available | Negative | 2194132 - 2194353 | 7881.59 |
| dna-binding response regulator | DWY53_09175 | Not Available | Positive | 2194607 - 2195605 | 38380.6 |
| hypothetical protein | DWY53_09180 | Not Available | Negative | 2196347 - 2197426 | 40319.9 |
| duf108 domain-containing protein | DWY53_09185 | Not Available | Positive | 2197723 - 2198511 | 28162.8 |
| dihydrofolate reductase | DWY53_09190 | Not Available | Negative | 2198494 - 2199378 | 32605.2 |
| molecular chaperone djla | DWY53_09195 | Not Available | Positive | 2199485 - 2200267 | 29022.9 |
| peptide chain release factor 3 | DWY53_09200 | Not Available | Negative | 2200343 - 2201911 | 59982.5 |
| dtdp-4-dehydrorhamnose reductase | DWY53_09205 | Not Available | Negative | 2201918 - 2202775 | 31996.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

