Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_00680 | Not Available | Negative | 180358 - 180771 | 15716.4 |
| hypothetical protein | DWY53_00685 | Not Available | Negative | 180775 - 181185 | 15494.5 |
| orf6n domain-containing protein | DWY53_00690 | Not Available | Negative | 181261 - 181821 | 21509.0 |
| l-aspartate oxidase | DWY53_00695 | Not Available | Positive | 181977 - 183557 | 58967.6 |
| aaa family atpase | DWY53_00700 | Not Available | Positive | 183807 - 185534 | 67981.9 |
| duf1593 domain-containing protein | DWY53_00705 | Not Available | Negative | 185586 - 186941 | 51247.5 |
| pectate lyase | DWY53_00710 | Not Available | Negative | 186958 - 189099 | 81698.4 |
| hypothetical protein | DWY53_00715 | Not Available | Positive | 189083 - 189307 | 8893.84 |
| s9 family peptidase | DWY53_00720 | Not Available | Negative | 189339 - 191582 | 85800.0 |
| glycoside hydrolase family 127 protein | DWY53_00725 | Not Available | Negative | 191594 - 193999 | 89592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

