Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chloride channel protein | DWY53_09100 | Not Available | Negative | 2172728 - 2174521 | 66651.6 |
| threonylcarbamoyl-amp synthase | DWY53_09105 | Not Available | Negative | 2174539 - 2175114 | 21163.3 |
| n-acetylglucosamine-6-phosphate deacetylase | DWY53_09110 | Not Available | Negative | 2175281 - 2176444 | 42262.9 |
| acrb/acrd/acrf family protein | DWY53_09115 | Not Available | Negative | 2176535 - 2179711 | 121074.0 |
| tolc family protein | DWY53_09120 | Not Available | Negative | 2179708 - 2181195 | 56925.7 |
| acrb/acrd/acrf family protein | DWY53_09125 | Not Available | Negative | 2181182 - 2184262 | 115372.0 |
| efflux rnd transporter periplasmic adaptor subunit | DWY53_09130 | Not Available | Negative | 2184267 - 2185334 | 39187.2 |
| o-antigen ligase domain-containing protein | DWY53_09135 | Not Available | Negative | 2185387 - 2187036 | 61935.2 |
| signal peptidase i | DWY53_09145 | Not Available | Negative | 2188552 - 2189454 | 35303.0 |
| hypothetical protein | DWY53_09150 | Not Available | Negative | 2189463 - 2191367 | 73726.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

