Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_08730 | Not Available | Negative | 2109277 - 2109534 | 9958.26 |
| hypothetical protein | DWY53_08735 | Not Available | Negative | 2109577 - 2109786 | 7755.15 |
| hypothetical protein | DWY53_08740 | Not Available | Negative | 2109826 - 2110062 | 9027.34 |
| m48 family peptidase | DWY53_08745 | Not Available | Positive | 2110471 - 2111256 | 28354.4 |
| addiction module antidote protein, higa family | DWY53_08750 | Not Available | Negative | 2111402 - 2111746 | 12991.2 |
| addiction module killer protein | DWY53_08755 | Not Available | Negative | 2111753 - 2112070 | 12365.8 |
| hypothetical protein | DWY53_08765 | Not Available | Negative | 2112576 - 2113157 | 22650.8 |
| hypothetical protein | DWY53_08770 | Not Available | Negative | 2113154 - 2113339 | 7416.87 |
| hypothetical protein | DWY53_08775 | Not Available | Negative | 2113441 - 2113803 | 14022.9 |
| hypothetical protein | DWY53_08780 | Not Available | Negative | 2113800 - 2114216 | 16277.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

