Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_08400 | Not Available | Negative | 2062334 - 2062726 | 15251.2 |
| dna-directed rna polymerase subunit beta | DWY53_08405 | Not Available | Negative | 2062748 - 2062963 | 7960.58 |
| lexa family transcriptional regulator | DWY53_08410 | Not Available | Positive | 2063079 - 2063783 | 26250.4 |
| hypothetical protein | DWY53_08415 | Not Available | Negative | 2063970 - 2064152 | 6803.6 |
| hypothetical protein | DWY53_08420 | Not Available | Negative | 2064192 - 2064434 | 8616.62 |
| duf4974 domain-containing protein | DWY53_08430 | Not Available | Negative | 2066011 - 2066997 | 38650.5 |
| hypothetical protein | DWY53_08440 | Not Available | Negative | 2067411 - 2067686 | 10368.3 |
| hypothetical protein | DWY53_08445 | Not Available | Negative | 2067708 - 2068685 | 35662.8 |
| hypothetical protein | DWY53_08450 | Not Available | Negative | 2068695 - 2069744 | 37585.5 |
| hypothetical protein | DWY53_08455 | Not Available | Negative | 2069741 - 2070052 | 11073.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

