Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1320 domain-containing protein | DWY53_08300 | Not Available | Positive | 2050090 - 2050515 | 16566.8 |
| duf935 family protein | DWY53_08305 | Not Available | Positive | 2050528 - 2051880 | 51414.8 |
| hypothetical protein | DWY53_08310 | Not Available | Positive | 2051919 - 2053424 | 57727.2 |
| hypothetical protein | DWY53_08315 | Not Available | Negative | 2053386 - 2053634 | 9270.71 |
| hypothetical protein | DWY53_08320 | Not Available | Positive | 2053697 - 2054326 | 24522.9 |
| hypothetical protein | DWY53_08325 | Not Available | Positive | 2054331 - 2054792 | 17456.4 |
| transposase | DWY53_08330 | Not Available | Negative | 2054775 - 2055044 | 10777.2 |
| duf3164 family protein | DWY53_08335 | Not Available | Negative | 2055155 - 2055817 | 26025.8 |
| hypothetical protein | DWY53_08340 | Not Available | Negative | 2055836 - 2056033 | 7552.23 |
| hypothetical protein | DWY53_08345 | Not Available | Negative | 2056020 - 2056205 | 7140.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

