Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase domain-containing abc transporter | DWY53_08095 | Not Available | Positive | 1996236 - 1998437 | 83592.8 |
| hlyd family secretion protein | DWY53_08100 | Not Available | Positive | 1998487 - 1999629 | 43823.5 |
| hypothetical protein | DWY53_08105 | Not Available | Positive | 1999663 - 1999863 | 7419.48 |
| radical sam protein | DWY53_08110 | Not Available | Positive | 1999841 - 2001352 | 58150.3 |
| peptidase c39 | DWY53_08115 | Not Available | Positive | 2001345 - 2001926 | 23420.5 |
| hypothetical protein | DWY53_08120 | Not Available | Negative | 2001892 - 2002515 | 23177.9 |
| hypothetical protein | DWY53_08125 | Not Available | Positive | 2002828 - 2003049 | 8449.06 |
| hypothetical protein | DWY53_08130 | Not Available | Positive | 2003046 - 2003267 | 8538.35 |
| rna degradosome polyphosphate kinase | DWY53_08135 | Not Available | Negative | 2003293 - 2005347 | 80461.5 |
| metallophosphoesterase | DWY53_08140 | Not Available | Positive | 2005405 - 2005902 | 18707.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

