Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | DWY53_00580 | Not Available | Positive | 152364 - 154511 | 81952.5 |
| serine acetyltransferase | DWY53_00585 | Not Available | Positive | 154812 - 155720 | 32799.2 |
| type ii toxin-antitoxin system hicb family antitoxin | DWY53_00590 | Not Available | Positive | 155871 - 156062 | 7388.35 |
| rna methyltransferase | DWY53_00595 | Not Available | Positive | 156574 - 158022 | 56304.4 |
| s9 family peptidase | DWY53_00600 | Not Available | Positive | 158029 - 160242 | 83627.3 |
| phosphoribosylamine--glycine ligase | DWY53_00605 | Not Available | Positive | 160258 - 161526 | 45595.0 |
| hypothetical protein | DWY53_00610 | Not Available | Positive | 161545 - 162480 | 35940.9 |
| deda family protein | DWY53_00615 | Not Available | Positive | 162456 - 162923 | 17015.3 |
| sam-dependent methyltransferase | DWY53_00620 | Not Available | Positive | 162928 - 163611 | 26029.9 |
| hypothetical protein | DWY53_00625 | Not Available | Negative | 163964 - 166963 | 110228.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

