Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobilization protein | DWY53_08035 | Not Available | Negative | 1988887 - 1989837 | 36148.3 |
| duf3408 domain-containing protein | DWY53_08045 | Not Available | Negative | 1990432 - 1990914 | 18396.8 |
| hypothetical protein | DWY53_08050 | Not Available | Negative | 1990928 - 1991278 | 13276.7 |
| dna-binding protein | DWY53_08055 | Not Available | Positive | 1991312 - 1991623 | 12302.7 |
| dna-binding protein | DWY53_08060 | Not Available | Positive | 1991706 - 1992014 | 12278.0 |
| hypothetical protein | DWY53_08065 | Not Available | Negative | 1992254 - 1992616 | 13738.8 |
| site-specific integrase | DWY53_08070 | Not Available | Negative | 1992613 - 1993824 | 45913.6 |
| site-specific integrase | DWY53_08075 | Not Available | Negative | 1993888 - 1995120 | 46735.1 |
| duf3244 domain-containing protein | DWY53_08085 | Not Available | Positive | 1995432 - 1995824 | 14547.5 |
| hypothetical protein | DWY53_08090 | Not Available | Positive | 1995845 - 1996081 | 9326.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

