Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | DWY53_07980 | Not Available | Positive | 1977457 - 1978890 | 55021.0 |
| dna-binding response regulator | DWY53_07985 | Not Available | Positive | 1978913 - 1979614 | 26867.4 |
| n-acetylglucosamine-6-phosphate deacetylase | DWY53_07990 | Not Available | Negative | 1979683 - 1980846 | 42267.2 |
| is1182 family transposase | DWY53_07995 | Not Available | Negative | 1981221 - 1982732 | 59191.7 |
| radical sam protein | DWY53_08000 | Not Available | Negative | 1982871 - 1983366 | 19749.6 |
| hypothetical protein | DWY53_08005 | Not Available | Negative | 1983469 - 1983651 | 6442.35 |
| hypothetical protein | DWY53_08010 | Not Available | Negative | 1983733 - 1983918 | 6428.26 |
| hypothetical protein | DWY53_08020 | Not Available | Negative | 1986642 - 1986887 | 9233.87 |
| peptidase s51 | DWY53_08025 | Not Available | Positive | 1987179 - 1987805 | 23448.6 |
| hypothetical protein | DWY53_08030 | Not Available | Negative | 1988099 - 1988842 | 28277.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

