Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | DWY53_07930 | Not Available | Positive | 1964358 - 1965425 | 39219.2 |
| acrb/acrd/acrf family protein | DWY53_07935 | Not Available | Positive | 1965425 - 1968550 | 115893.0 |
| tolc family protein | DWY53_07940 | Not Available | Positive | 1968583 - 1969962 | 51469.9 |
| dna-binding protein | DWY53_07945 | Not Available | Negative | 1970177 - 1970881 | 26979.7 |
| hypothetical protein | DWY53_07950 | Not Available | Negative | 1970847 - 1970966 | 4138.87 |
| hypothetical protein | DWY53_07955 | Not Available | Positive | 1971286 - 1971957 | 25581.6 |
| hypothetical protein | DWY53_07960 | Not Available | Positive | 1972095 - 1973024 | 35628.4 |
| atp-binding cassette domain-containing protein | DWY53_07965 | Not Available | Positive | 1973021 - 1973698 | 25555.1 |
| carboxypeptidase-like regulatory domain-containing protein | DWY53_07970 | Not Available | Negative | 1973755 - 1976415 | 102438.0 |
| glpgli family protein | DWY53_07975 | Not Available | Negative | 1976420 - 1977286 | 32794.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

