Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroorotate dehydrogenase | DWY53_07510 | Not Available | Negative | 1869440 - 1870351 | 32305.3 |
| dihydroorotate dehydrogenase electron transfer subunit | DWY53_07515 | Not Available | Negative | 1870339 - 1871118 | 28483.2 |
| xre family transcriptional regulator | DWY53_07520 | Not Available | Negative | 1871212 - 1871664 | 17319.5 |
| dna polymerase iii subunit delta | DWY53_07530 | Not Available | Negative | 1872786 - 1873802 | 38857.2 |
| amp nucleosidase | DWY53_07535 | Not Available | Negative | 1873814 - 1874590 | 29142.2 |
| hypothetical protein | DWY53_07540 | Not Available | Positive | 1874648 - 1875097 | 17607.4 |
| hypothetical protein | DWY53_07545 | Not Available | Negative | 1875198 - 1875989 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DWY53_07550 | Not Available | Negative | 1875998 - 1877092 | 40621.9 |
| hypothetical protein | DWY53_07555 | Not Available | Negative | 1877154 - 1877432 | 10839.2 |
| abc transporter permease | DWY53_07560 | Not Available | Negative | 1877491 - 1878288 | 29543.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

