Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna gyrase subunit a | DWY53_07460 | Not Available | Negative | 1854480 - 1857047 | 96467.1 |
| atp-dependent clp protease atp-binding subunit | DWY53_07465 | Not Available | Positive | 1857412 - 1859928 | 93935.9 |
| molecular chaperone htpg | DWY53_07470 | Not Available | Positive | 1860063 - 1862108 | 78122.2 |
| patatin | DWY53_07475 | Not Available | Positive | 1862238 - 1864547 | 87792.8 |
| Trna-arg | Not Available | Not Available | Positive | 1864636 - 1864709 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1864772 - 1864848 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1864866 - 1864942 | Not Available |
| 4-hydroxy-tetrahydrodipicolinate synthase | DWY53_07495 | Not Available | Negative | 1865308 - 1866201 | 32837.3 |
| dna ligase (nad(+)) liga | DWY53_07500 | Not Available | Negative | 1866303 - 1868300 | 75175.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DWY53_07505 | Not Available | Positive | 1868399 - 1869073 | 25423.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

