Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DWY53_07410 | Not Available | Positive | 1844055 - 1845152 | 41517.0 |
| vwa domain-containing protein | DWY53_07415 | Not Available | Positive | 1845172 - 1846170 | 37254.6 |
| vwa domain-containing protein | DWY53_07420 | Not Available | Positive | 1846183 - 1847205 | 37851.1 |
| tetratricopeptide repeat protein | DWY53_07425 | Not Available | Positive | 1847215 - 1847922 | 27631.4 |
| protein batd | DWY53_07430 | Not Available | Positive | 1847962 - 1849797 | 67647.8 |
| tetratricopeptide repeat protein | DWY53_07435 | Not Available | Positive | 1849817 - 1850635 | 30730.3 |
| phosphatase pap2 family protein | DWY53_07440 | Not Available | Positive | 1850646 - 1851353 | 26838.5 |
| dna-binding protein | DWY53_07445 | Not Available | Positive | 1851483 - 1851752 | 9982.98 |
| universal stress protein | DWY53_07450 | Not Available | Positive | 1851828 - 1852955 | 43154.8 |
| hypothetical protein | DWY53_07455 | Not Available | Negative | 1853232 - 1854449 | 45948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

