Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cina family protein | DWY53_07360 | Not Available | Positive | 1836173 - 1836673 | 17534.8 |
| 50s ribosomal protein l28 | DWY53_07365 | Not Available | Positive | 1836778 - 1837038 | 9789.04 |
| 50s ribosomal protein l33 | DWY53_07370 | Not Available | Positive | 1837059 - 1837247 | 7205.97 |
| duf4295 domain-containing protein | DWY53_07375 | Not Available | Positive | 1837257 - 1837412 | 5827.19 |
| signal recognition particle-docking protein ftsy | DWY53_07380 | Not Available | Positive | 1837586 - 1838545 | 34716.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DWY53_07385 | Not Available | Positive | 1838549 - 1839847 | 50104.2 |
| hu family dna-binding protein | DWY53_07390 | Not Available | Positive | 1839921 - 1840193 | 10202.5 |
| hu family dna-binding protein | DWY53_07395 | Not Available | Positive | 1840219 - 1841649 | 52554.7 |
| atpase | DWY53_07400 | Not Available | Positive | 1841935 - 1842930 | 37374.8 |
| duf58 domain-containing protein | DWY53_07405 | Not Available | Positive | 1843180 - 1844049 | 33730.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

