Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-acetyl-adp-ribose deacetylase | DWY53_07310 | Not Available | Positive | 1826575 - 1827201 | 22651.2 |
| sigma-54-dependent fis family transcriptional regulator | DWY53_07315 | Not Available | Negative | 1827591 - 1828928 | 49964.5 |
| glycine betaine/l-proline abc transporter atp-binding protein | DWY53_07320 | Not Available | Positive | 1829230 - 1830456 | 45636.3 |
| proline/glycine betaine abc transporter permease | DWY53_07325 | Not Available | Positive | 1830453 - 1831277 | 29538.8 |
| glycine/betaine abc transporter substrate-binding protein | DWY53_07330 | Not Available | Positive | 1831280 - 1832122 | 31666.2 |
| dmt family transporter | DWY53_07335 | Not Available | Positive | 1832267 - 1833175 | 34069.1 |
| sugar o-acetyltransferase | DWY53_07340 | Not Available | Positive | 1833188 - 1833739 | 20098.3 |
| hypothetical protein | DWY53_07345 | Not Available | Negative | 1833799 - 1834017 | 8234.71 |
| type i methionyl aminopeptidase | DWY53_07350 | Not Available | Positive | 1834254 - 1835108 | 31838.1 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DWY53_07355 | Not Available | Positive | 1835132 - 1836151 | 36941.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

