Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AF25-30LB |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1558347 bp
Thymine Count
1558364 bp
Guanine Count
1138401 bp
Cytosine Count
1152170 bp
Genome Length
5408603 bp
Protein-coding Genes
4536 genes
Non-Coding Genes
107 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DWY53_07205 | Not Available | Negative | 1799639 - 1802668 | 111498.0 |
| hypothetical protein | DWY53_07210 | Not Available | Negative | 1802836 - 1803015 | 7034.63 |
| glycoside hydrolase family 97 protein | DWY53_07215 | Not Available | Negative | 1803068 - 1805284 | 84341.1 |
| alpha-amylase | DWY53_07220 | Not Available | Negative | 1805326 - 1807176 | 70789.9 |
| hypothetical protein | DWY53_07225 | Not Available | Positive | 1807425 - 1809020 | 62507.7 |
| hypothetical protein | DWY53_07230 | Not Available | Negative | 1809127 - 1809423 | 11332.5 |
| hypothetical protein | DWY53_07240 | Not Available | Negative | 1809547 - 1809792 | 9481.4 |
| hypothetical protein | DWY53_07245 | Not Available | Negative | 1809932 - 1812418 | 89607.7 |
| arac family transcriptional regulator | DWY53_07250 | Not Available | Negative | 1812535 - 1813020 | 19011.1 |
| glycoside hydrolase family 15 protein | DWY53_07255 | Not Available | Negative | 1813172 - 1814959 | 69838.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

